ar0ch Goto Github PK

aligngraph

Algorithm for secondary de novo genome assembly guided by closely related references

amnesiathedarkdescent

aroonchan.de

https://aroonchan.de

bioconda-recipes

Conda recipes for the bioconda channel.

biol-4150

chocolatey-ncbi-blast

A template to use when setting up to create packages both manual and automatic

cookiecutter-flask-restful

Flask cookiecutter template for builing APIs with flask-restful, including JWT auth, cli, tests, swagger, docker and more

covid-19-event-risk-planner

Charts that estimate collective risk that large events will have one (or more) COVID-19 positive individuals.

covid19-event-risk-planner

COVID19 risk planner R-Shiny application

cs4710

cv

Latex markup for my CV: https://aroonchande.com/cv

desktopdeployr

A framework for deploying self-contained R-based applications to the desktop

docker-ubuntu-vnc-desktop

Docker image to provide HTML5 VNC interface to access Ubuntu LXDE and LXQT desktop environment

docker_mlst

Docker containers for running MLST software

dotfiles

kui's dotfiles and scripts

edge

EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.

eggnog-mapper

Fast genome-wide functional annotation through orthology assignment

examples

Simple guided examples of how to use Caddy

git-remote-dropbox

A transparent bridge between Git and Dropbox - use a Dropbox (shared) folder as a Git remote! :gift:

gitignore

A collection of useful .gitignore templates

gottcha

More details and updates can be found in our homepage and LANL-Bioinformatics Github site (https://github.com/LANL-Bioinformatics/GOTTCHA). Please visit our homepage at

gwas-ui

hammerlab_scripts

html-to-svg

svg screenshot of web pages (saves the given URL to an SVG file)

kounta

🧮 🔢 Generate multi-sample k-mer count matrix from WGS

lyve-set

LYVE-SET, a method of using hqSNPs to create a phylogeny, especially for outbreak investigations

macsyfinder

MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.

metapathways2

MetaPathways v2.0: A master-worker model for environmental Pathway/Genome Database construction on grids and clouds

mic_prediction

Code for doing MIC predictions on genomes

microscope

Interactive heatmap visualization software using RShiny and JavaScript (D3.js)