AttributeError about genomad

[apcamargo]

Sure! Can you share the file with me so I can try to replicate? This is an issue I've never seem before. Looks like a problem with the prodigal-gv output.

[deminatanja]

Hi,
My previous problem of having not enough disk space seems to be solved by reserving some local disk space for the temporary directory, the test run is on-going, but it has definitely already run further than the first time when the memory error appeared.
I will also test this smaller dataset with the same approach and let you know how it goes.

[deminatanja]

Update: the big dataset run completed successfully! The memory reservation for the temp dir has helped.
The smaller one is running.

[apcamargo]

Good to know :)

[deminatanja]

Update2: The smaller run has also finished without troubles. Apparently the AttributeError was also somehow due to the lack of temp dir memory reservation. The issue can be closed :)

[apcamargo]

Great! Just let me know in case you have this error again and I'll reopen it :)