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adipocytes

Metabolic flux analysis in adipocytes

auto-escher-map-for-cobrapy

Tool for generating an Escher map of a Cobra metabolic model

bamfa

Bayesian metabolic flux analysis

codingtest

data_science_capstone

donorchoose

getting-started-with-genomics-tools-and-resources

Unix, R and python tools for genomics

gwa_tutorial

A comprehensive tutorial about GWAS and PRS

introduction-to-genomic-analysis

Welcome to the website and github repository for the Introduction to Genomic Analysis Workshop Series, taught by Phillip Richmond and supported by Compute Canada, WestGrid, University of British Columbia Advanced Research Computing, and BC Children's Hospital Evidence 2 Innovation.

leidenalg

Implementation of the Leiden algorithm for various quality functions to be used with igraph in Python.

machine-learning-resource

medicalzoopytorch

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

nonstationary-mfa

Genome-scale nonstationary 13C metabolic flux analysis

opticontest

Mathematical optimization problems

rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

scanpy

Single-Cell Analysis in Python. Scales to >1M cells.

steadystate-mfa

Genome scale steady state 13C metabolic flux analysis

titanic

An R data package containing Kaggle Titanic datasets

titanic_survival_prediction