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Andy Thomson's Projects

accu-rust-talk icon accu-rust-talk

Talk on Rust for the Oxford ACCU https://www.meetup.com/ACCU-Oxford/events/267447759/

andyzip icon andyzip

A fast and compact modern C++ (header only) zip, bzip2 and brotli library

arrow icon arrow

Apache Arrow is a cross-language development platform for in-memory data. It specifies a standardized language-independent columnar memory format for flat and hierarchical data, organized for efficient analytic operations on modern hardware. It also provides computational libraries and zero-copy streaming messaging and interprocess communication. Languages currently supported include C, C++, Java, JavaScript, Python, and Ruby.

arrow2 icon arrow2

Transmute-free Rust library to work with the Arrow format

arvados icon arvados

An open source platform for managing and analyzing biomedical big data

async-exec icon async-exec

Execute parallel tasks on data from object stores such as arvados.

bam.js icon bam.js

JavaScript and Python SAM and BAM library

bamtools icon bamtools

C++ API & command-line toolkit for working with BAM data

bgen icon bgen

A BGEN file format reader.

bitzip icon bitzip

Library and utility for compressing bitstreams

boost_dna icon boost_dna

Experiments to make a boost-style indexed DNA database

bwa icon bwa

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

c-17_test icon c-17_test

Experiment with C++17 support on a few compilers

dungeon_generator icon dungeon_generator

Example dungeon generator for Goldsmiths MScCGE tools and middleware project.

enigma icon enigma

High performance solutions to New Scientist Enigma puzzles

ensembl-rest icon ensembl-rest

Language agnostic RESTful data access to Ensembl data over HTTP

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