amnsbr Goto Github PK

amnsbr.github.io

My personal web page

app-remove-first-volumes

Simple Brainlife app which removes the first volumes of fMRI images

bigbrainwarp

BigBrainWarp

bnm_cuda

Biophysical network modeling of the brain

byte-of-python-as-notebook

Beginners book on Python - start here if you don't know programming

cng_cingulate_gradients

cubnm

A toolbox for biophysical network modeling on GPUs

demo

eidev

Adolescent development of E-I using biophysical network modeling

enigma

The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠

hbnm

Hierarchical brain network model (Demirtas et al., 2019)

laminar_organization

The data and code of Saberi et al. 2023 PLOS Biology

micapipe

micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below

mrtrix3-pyio

Python package to interface with MRtrix3 file formats.

nimare

Coordinate- and image-based meta-analysis in Python

nimare-gpu

GPU-accelerated activation likelihood estimation meta-analysis (a GPU wrapper for NiMARE)

pasat

Paced Auditory Serial Addition Test with PyQt5

review-speed

An app for extracting and presenting peer review speed data of journal articles

surface_tools

Tools for mesh surface-based operations

tvb_c

A C implementation of TVB's simulation core. It implements a brain network model composed of ReducedWongWang neural masses with feedback inhibition control (Schirner et al. 2018, Deco et al. 2014)