alyssafrazee Goto Github PK

alyssafrazee.github.io

alyssafrazee.com

ballgown

Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.

ballgown-release

release version of "ballgown" Bioconductor package

bioccheck

booya

moving a subfolder into here

bpcounting

code for getting per-bp coverage from read alignment files

capitalin21stcenturyinr

Piketty in R

cards

fun with cards in R

committeechecker2

forming a preliminary oral exam or thesis committee at JHSPH? then this is the app for you! enter your faculty info, and it'll tell you whether or not your committee satisfies the rules.

derfinder-1

Fast differential expression analysis of RNA-seq data at base-pair resolution

efficiency_analytics

code/analysis of computational time and memory use for batch jobs

fivehundred

interactive five-hundred card game!

github_analysis

code for analysis of github repo ownership and gender

hackerschool

I'll store the code I write at Hacker School (hackerschool.com) during summer 2013 in this repo.

happyhourarchive

jtleek.github.io

Website

last_name_analytics

quick analysis of frequency of US last names using 2000 Census data

line-by-line

Sublime Text 2 plugin allowing users to run commands in Terminal/iTerm easily with one keyboard shortcut

neveragaindottech.github.io

Source files for the neveragain.tech site

pelican-sundown

Sundown (from github pages) inspired theme for pelican

polyester

Bioconductor package "polyester", devel version. RNA-seq read simulator.

polyester-release

release version of "polyester" Bioconductor package

protocols

This will be a directory of lab analysis protocols.

randomcalendars

Re-implementation of Hilary's random calendar generator using the Google Calendar API

read.csv.sql

The "read.csv.sql" function (from R's sqldf library), without the Tcl/tk dependency!

rskittlebrewer

for those times you want to make plots with candy-themed color schemes

scrapy

Scrapy, a fast high-level screen scraping and web crawling framework for Python.

testingtesting

a breakable repo for playing with git :)

tidypredict

Run predictions inside the database

usefulstuff

miscellaneous R functions I've found useful