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Altius Institute for Biomedical Sciences's Projects

ab1-viewer icon ab1-viewer

React web trace component for viewing ab1 files

byte-store icon byte-store

Efficient and fast storage and querying of pairwise score data for hypothesis testing

dhsvocabulary icon dhsvocabulary

Code used to derive a regulatory Vocabulary of DHSs using NMF

hotspot2 icon hotspot2

Implementation of hotspot2 by Eric Rynes

index icon index

Methods and code for deriving an Index of DNaseI hypersensitive sites

sge2slurm icon sge2slurm

Compatibility wrappers for adapting SGE workflows to SLURM (via Matt Maurano, with local changes)

soda icon soda

Soda plot gallery generator

tree-aggregate icon tree-aggregate

Decision Tree Classifier and related aggregates (like Random Forests) meant for large yet sparse feature spaces

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