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achilles

Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a OMOP CDM database

achilles_v4

achillesweb

Interactive web site for reviewing the results of the Achilles R package.

annotator

Annotation tools for the web. Select text, images, or (nearly) anything else, and add your notes.

arachnecommons

Commons module contains common code re-used between all Arachne components

ares

A Research Exploration System

aresindexer

R package that creates the index and relevant files for an Ares deployment.

atlas

ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

atlasmodule

A strategus module for integrating Atlas assets

broadsea

Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.

broadsea-atlasdb

A Postgresql database in a Docker container for OHDSI Atlas/WebAPI

broadsea-dqd

[under development]

broadsea-hades

[under development]

broadsea-solr

[under development]

broadsea-webtools

A Docker container that includes the OHDSI WebAPI (running in Apache Tomcat) and the OHDSI web applications.

cdmcutover

R package for preparing CDMs for implementation in Atlas

cdmmetadata

An R Package / Shiny App to Prototype CDM Metadata Tables

cdmsourcemetaparser

cdmv4tov5

R package of CDM v4 to v5 script

charlsonindexgenerator

cohortcomparison

A package to visualize differences in cohorts using extracted features

cohortdiagnostics

An R package for performing various cohort diagnostics.

cohortmethod

An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

commondatamodel

Definition and DDLs for the OMOP Common Data Model (CDM)

databaseconnector

An R package for connecting to databases using JDBC.

databaseconnectorjars

An R package containing the external JAR dependencies of the DatabaseConnector package.

dataqualitydashboard

A tool to help improve data quality standards in observational data science.

epiretreat

era-constructor

This is a repo that contains standardized code for hte construction of Drug Eras, Dose Eras and Condition Eras

etl-cdmbuilder

ETL-CDMBuilder is a repo containing a .NET application to perform ETL to OMOP CDMv4 for multiple databases