alexvcaron Goto Github PK

alexvcaron.github.io

boiteaclou.github.io

bundle_mpc

container_workshop

containers-scilus

Files needed to build a container to run all scilus flows.

dmriqc_flow

A Nextflow pipeline for diffusion MRI quality check

dmriqcpy

Diffusion MRI Quality Check in python

dvc-data

DVC's data management subsystem

fury

FURY - Free Unified Rendering in pYthon.

longitudinal_image_statistics

Short script to compute stability statistics on image timeseries of a group of subjects. Available statistics are : intra and inter subject variation and pearson correlation coefficients, I2C2 coefficient. Bootstrapping is available for variation coefficient and I2C2.

mastawrap

Little fun at language wrapping and work distribution framework

mrhardi

Multi-usage python library for processing and modeling of diffusion MRI images. For pipelining tools, see mrHARDIflow at https://github.com/AlexVCaron/mrHARDIflow.

mrhardiflow

mrHARDI is an automated multi-resolution diffusion MRI processing pipeline implemented in Nextflow.

nextflow-website

Nextflow public web site

nf-core-modules

nf-scil modules repository

nf-core-tools

Python package with helper tools for the nf-core community.

nf-mri-modules

Repository storing Nextflow modules definitions for popular and state-of-the-art MRI processing technologies

nf-neuro

nf-scil

SCIL Nextflow Toolbox

nf-scil-fibercup

new repository for fiber cup

nf-tractoflow

nft-nifti

nhp-brainextraction

niftijio

A Java library for reading and writing NIfTI volumes

para_map_reduce

para_map_reduce_tests

Litterature from the public domain extracted from Wolfram Data Repository

para_mpi_game

projt-poo-imn

scil-documentation

Documentation for the SCIL

scilpy

The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox