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2017-02-09-analisifuncionalbrca-uab

A talk on Pathway Analysis for the Dr. Eduard Escrich's group at UAB

2019-07-user-a-shiny_app_for_sgrm

2019-07-UseR-A Shiny_App_for_Selecting Genes (potentially) Regulated by Methylation

2019-09-lessons_learned_from_user2019

Sharing our experiences and views from UseR! 2019

2019-10_statisticalpill_correlation

A short talk on issues related with correlation uses and misuses in biomedical research

2019-11-statisticalpill-multiple-testing

Materials for a talk on multiple testing adjustments

2020_02-multiomics_analysis_with-rgcca

Using RGCCA and SGCCA 4 multiomics analysis

anintro2functionalanalysis

Some scripts, notebooks and sweave files to illustrate a variety of functional analyses on omics data with Bioconductor or using web tools

anovatools

Paquet per estendre l'ANOVA d'R a alguns models d'efectes aleatoris

basicp

biom

Construcción y validación de un biomarcador a partir del paquete CMA de R

biosigtools

A first version of a Shiny App to implement some Biological Significance Tests. ONLY A DRAFT by now

build_validate_classifier

An example of building and validating classifiers for microarray data built to be easily recycled with other data. See also the "biom" package which has been developed from this repository to simplify the process

ejemplo_de_analisis_de_microarrays_con_bioconductor

exploretweeter

Simple application to extract and explore data from Twitter

expressionsetdf

A simple Bioconductor ExpressionSet-likewhere the exprs Slot is a data.frame

genelists

Functions for filtering gene lists

getdatafromtcga

Some examples on how to fetch data from TCGA using distinct Bioconductor packages

goprofiles-devel

This repo is intended to contain development versions of packages

links2file

loadfrombinfile

Loads specific objects from a binary R file (selected by name or position) into memory

marco

Simple templates for rmarkdown

matrixfactorization-workshop

Workshop on data integration and data sharing for GRBio's retreat in July 2021

mlshortcourse

Material for 2019 Analytics Summit Machine Learning with R Training

obesity_and_metabolomics_data_analysis

Materials for a lab on Obesity and Metabolomics

pipeline_targets

Repository implementing the "targets" pipeline developed by Marina Carrera in her BSc. Thesis

prepare4mfa

Simple R package with a few functions to facilitate preparation of datasets for MFA

retreat

GRBio retreat

scripts

Collection of to-be-shared scripts

scripts-1

Scripts R

statisticalanalysisofmicroarraydata

Materials, data, code etc. for a book chapter on Statistical Analysis of Microarray Data.