Comments (2)
The given error output appears to be an issue involved with the multiprocessing python package used on Windows (and linux) machines when running commands from within a script. Can I please ask you to try the example input from an interpreter (i.e. straight on command line/terminal)?
Alternatively, if you are running the example code within a script, you can try adding the following:
# All import functions
# Place here
if __name__ == '__main__':
# All user code
# Place here
from sigprofilerclusters.
# All import functions
# Place here
if __name__ == '__main__':
# All user code
# Place here
works fine. Thank you.
from sigprofilerclusters.
Related Issues (15)
- some issues when running SigProfilerClusters? HOT 1
- Problem with MNV records in Mutect2 VCFs HOT 3
- Is txt input eligible? HOT 9
- rainfallPlots is missing. HOT 4
- How to tell the Clusters to use the VAF in MAF input? HOT 1
- UnboundLocalError: local variable 'matrix_file_suffix' referenced before assignment HOT 2
- issue with using CCFs HOT 6
- imds_corrected when correction=True and chrom_based=True HOT 1
- How to set parameters to run SigProfilerClusters for INDEL? HOT 5
- column to extract VAF when standardVC HOT 1
- Error: There are no simulated data present for this project. HOT 1
- No such file or directory: '.output/simulations/data/imds.pickle' HOT 1
- Program always exits with no logging or error message HOT 3
- FileNotFoundError: [Errno 2] No such file or directory: './Allen_Pat02_ID/output/vcf_files_corrected/cancer_clustered/INDEL/output/ID/cancer_clustered.ID83.all' HOT 6
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from sigprofilerclusters.