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👨🏻‍💻  About Me

I am a biophysicist passionate about molecular modeling, currently 🔭 working on deep learning applications for life sciences. I'm originally from 🏖️ Cuba, but I live in 🏔️ Cambridge, MA. My future goals 🌱 are to improve my skills in Pytorch and NLP, and 💪🏼 to create stunning data visualizations.

🪁  Interests

I am learning about filmmaking, mainly how to shoot and light a scene. Hiking. Reading manga and comics, but mostly Eiichiro Oda, Jonathan Hickman, and Grant Morrison. Amateur Barista, always looking for the best cup of espresso.

🛠  Languages and Tools

Python C Markdown GitLab GitHub Travis-CI Tensorflow Sklearn Windows Linux

🤝🏻  Professional networks

⚙️  GitHub Analytics

Alejandro Gil-Ley's Projects

chemgraphs icon chemgraphs

Predicting the inhibitory response of drugs using Graph Convolutional Networks trained on censored data.

deepchem icon deepchem

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

esm icon esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

lipid_msd_map icon lipid_msd_map

Calculated the MSD of each lipid head in a bilayer and map it to a grid.

mdanalysis icon mdanalysis

MDAnalysis is a Python library to analyze molecular dynamics trajectories.

proteinnet icon proteinnet

Standardized data set for machine learning of protein structure

pymbar icon pymbar

Python implementation of the multistate Bennett acceptance ratio (MBAR)

sapiens icon sapiens

Sapiens is a human antibody language model based on BERT.

seqlike icon seqlike

Unified biological sequence manipulation in Python

spektral icon spektral

Graph Neural Networks with Keras and Tensorflow 2.

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