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aidaanva-genomeassembly

bioconda-recipes

Conda recipes for the bioconda channel.

configs

Config files used to define parameters specific to compute environments at different Institutions

eager

A fully reproducible and state-of-the-art ancient DNA analysis pipeline

eager2-paper

endors.py

endorS.py calculates endogenous DNA from samtools flagstat files and print to screen

fork-mulled

Mulled - Automatized Containerized Software Repository

fork-multi-package-containers

Testing building mulled containers for multi-requirement tools.

genosl

Script to genotype single stranded libraries based on forward and reverse read mapping

lnbaplague

Repository containing data and code employed for the study of the LNBA plague

mag-fork

Assembly and binning of metagenomes

mdf

Filtering missing data from a fasta alignment

modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

pandora2eager

Gather information from pandora and format it for use with nf-core/eager

test-datasets

Test data to be used for automated testing with the nf-core pipelines

yeast-pangenome

yeast pangenome