agvaughan Goto Github PK
Name: Alex Vaughan
Type: User
Bio: Neuroscience, ML, bioinformatics, and MLops.
Twitter: agvaughan
Blog: vaughan.bio
Alex Vaughan's Projects
agvaughan.github.io
Profile website (Forked from academicpages.github.io and mmistakes/minimal-mistakes)
bioindustrial-park
BioSTEAM's Premier Repository for Biorefinery Models and Results
biosteam
The Biorefinery Simulation and Techno-Economic Analysis Modules; Life Cycle Assessment; Chemical Process Simulation Under Uncertainty
bpod_r0_5
Open source behavior measurement and control
cr-sparse
Functional models and algorithms for sparse signal processing
deprectated__xarray_render
Fast 3d renderer for large ND arrays using xarray, dask, and jax.
dockerized_ml
Opinionated minimalist workflow for dockerized ml research.
ellipticalclustering
ember2
Alignment-free structure prediction using protein language models (Google Collab-Compatible!)
gitm
Simple matlab wrapper for git.
haikus-test
kjbd_bot
lockin_decoder
Software implementation of lockin amplifier, which is a high-Q amplifier and filter for AM-modulated signals. Originally used for physics metrology, optimized here for fiber photometry.
protein_lm
Protein Language Models (Experimental)
rnn
RNN experiments
watershed
wtfigure
What's that figure?
xarray_render
Fast 3d renderer for large ND arrays using xarray, dask, and jax.
xtiff
A tiny Python library for writing multi-channel TIFF stacks.
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