agraubert Goto Github PK

8-board_solver

agraubert.github.io

The source code for this website

agutil

A collection of python utilities -- Project migrated to gitlab

argcomplete

Python and tab completion, better together.

autocomplete-gml

GML autocompletions in atom

beymax

A custom Discord bot and high-level bot API -- Moved to GitLab

bioconda-recipes

Conda recipes for the bioconda channel.

catkinize

A collection of scripts to convert ROS stacks to Catkin

civic-client

Web client for CIViC: Clinical Interpretations of Variants in Cancer

civic-server

Backend Server for CIViC Project

cromwell

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

dalmatian

dalmatian is a collection of high-level companion functions for Firecloud and FISS.

discord.py

An API wrapper for Discord written in Python.

equationbrackets

Code used in the 2014 Equation Brackets game at Washington University in St. Louis.

fiss

FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine

git-tab-manager

An Atom plugin to close and re-open tabs as you change branches

graubs.info

A URL shortener and file exchange

lapdog

A python module, CLI, and browser-based UI to run jobs outside of Firecloud

manifest-bot

A discord bot built to help me track boxes while packing my house. Maybe it'll help you, I dunno

maze-scripts

media-scripts

A collection of scripts and utilities for managing my Plex library. You may or may not find this useful

miniwdl

A static analysis toolkit for the Workflow Description Language

pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

paramiko

The leading native Python SSHv2 protocol library.

phaser

phasing and Allele Specific Expression from RNA-seq

pvac-seq

A cancer immunotherapy pipeline

pvac-seq-client

browser client for the pVAC-Seq project

quicksave

A (very) simple file versioning system -- Migrated to GitLab

rip-vibecheck

seqlib

C++ htslib/bwa-mem/fermi interface for interrogating sequence data