agilebiofoundry Goto Github PK

2019-02.26-28-cell-factory-design-course

2019-04-22-omicsdashboard-tutorial

2019-05.09-cell-factory-design-abf-meeting

2021-07-16-cell-factory-design

aspergillusq4milestone

bbh

Bidirectional Best Hits using exonerate

cameo

cameo - computer aided metabolic engineering & optimization

chlamydomonas_reinhardtii_metabolic_model

Chlamy metabolic model

chlamynet

A web based tool developed using the R package shiny to explore a Chlamydomonas reinhardtii gene co-expression network

cisregmodels

Scripts for building computational models of gene regulation with tensorflow

emsl-summer-school-2021-fluxomics

fa-ngs

This is a software utility for calculating pooling volumes and graphing quality control data of next generation sequencing (NGS) libraries.

gemeditor

A graphical editor for the reconstruction, annotation and testing of genome-scale models

genomic-ulmfit

ULMFiT for Genomic Sequence Data

lstarkeyigsm

Lipomyces starkeyi GSM Development

multiomicspaper

powrs

Position-sensitive word-set DNA motif finder

promoter_design

Promoter activity measurement and modeling; artificial promoter design and testing

rt_ifo0880

Genome-scale metabolic network reconstruction and modeling of Rhodosporidium toruloides IFO0880

synelcyc

Pathway-genome database for synechococcus elongatus

wholecell

Mycoplasma genitalium whole-cell model

wholecellecolicyc

WholeCellE.coli

wholecellecolirelease

Release of the whole cell E. coli model.

wholecellsimdb

WholeCellDB is a hybrid SQL/HDF database for storing and retrieving whole-cell model predictions.