Comments (2)
@svteichman I just spoke with @ailurophilia who tells me that coverage was higher at some point -- perhaps a merge/PR lost some tests, or reintroduced a large untested function (phylodivnet). So this may not be as hard as it sounds, but may require some sleuthing! (Maybe this helps)
from divnet.
Closing this issue because the code coverage is now up to 92%.
from divnet.
Related Issues (20)
- use speedyseq instead of phyloseq HOT 1
- vignette detailing general guidance for using covariates... HOT 3
- Can phylodivnet be added to betaDiversity vignette? HOT 5
- Problem with simplifyBeta() HOT 6
- Estimating Shannon Evenness with uncertainty and other parameters associated with diversity values HOT 1
- Cannot allocate vector of size with suspiciously large phyloseq object HOT 6
- simplifyBeta() missing functionality for aitchison distance HOT 3
- Error in default_network(sigma) HOT 5
- testBetaDiversity pseudo F-statistic calculation HOT 2
- Choice of base ASV and influence on reproducibility HOT 7
- rename master to main HOT 1
- Diversity estimates not plausible HOT 16
- DivNet on rRNA gene counts derived from metagenomes? HOT 7
- R "killed" or cores not returning data HOT 4
- X covariate table and the intercept HOT 2
- DivNet on Transcripts per Million (TPM) values derived from metagenomic data HOT 4
- Is there a minimum number of samples required for testBetaDiversity?
- unit tests HOT 2
- problems with beta_diversity.Rmd HOT 12
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from divnet.