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awesome-qurit

A curated list of awesome tools and resources used at Qurit.

bccancer_qipcm

collaboration files between bccancer and uhn

brain-pet-sim-recon

C/Matlab-based PET simulation and reconstruction software that enables realistic brain simulations.

cc-scripts

Scripts to run Duetto and related utilities on Compute Canada's network

datasets

hecktor_2022

All code from members in the Qurit group working on the Hecktor 2022 challenge

intf2dicom_dosimetry

ohifviewers

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

pet_sim_recon_updated

Update of Saeed's PET_Sim_Recon code

pytomography

This repository enables easy and fast medical image reconstruction in Python.

pytomography_paper_code

Collection of scripts used to obtain paper for PyTomography paper.

rt-utils

A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.

simind_simulations

simset_simulations

stir_tutorial

tensor_radiomics

Radiomics features (RFs) extract quantitative information from medical images, towards the derivation of biomarkers for clinical tasks such as diagnosis, prognosis, or treatment response assessment. Different image discretization parameters (e.g. bin number or size), convolutional filters, or multi-modality fusion levels can be used to generate radiomics signatures. Commonly, only one set of parameters is used; resulting in only one value or ‘flavour’ for a given RF. We propose ‘tensor radiomics’ (TR) where tensors of features calculated with multiple combinations of parameters (i.e. flavours) are utilized to optimize the construction of radiomics signatures.

tumorsim

Cellular simulations of tumor growth

websitebios

This repository includes the bios to include in the website for each member of the team

xcat-sims