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Name: Nadeem Lab @ Memorial Sloan Kettering Cancer Center

Type: Organization

Bio: Integrative Biomedical Data Analysis Lab (macro: radiology/surgery + meso: pathology + micro: molecular)

Location: New York, NY

Blog: https://nadeemlab.org/

Nadeem Lab @ Memorial Sloan Kettering Cancer Center's Projects

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Computational Endoscopy Platform (advanced deep learning toolset for analyzing endoscopy videos) [MICCAI'22, MICCAI'21, ISBI'21, CVPR'20]

cg-gnn icon cg-gnn

Create cell graphs from pathology slide data and train a graph neural network to predict patient outcomes for SPT.

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Clinically-Interpretable Radiomics [MICCAI'22, CMPB'21]

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Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24]

dosertx icon dosertx

Domain knowledge driven 3D radiation dose prediction [PMB'22]

impartial icon impartial

Interactive deep learning whole-cell segmentation and thresholding using partial annotations

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Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'23, PMB'21, Medical Physics'21, AAPM'21]

seqx2y icon seqx2y

Sequence-to-sequence image and contour prediction library for longitudinal datasets [PMB'23]

spt icon spt

Spatial profiling toolbox for spatial characterization of tumor immune microenvironment in multiplex images

spt-cg-gnn icon spt-cg-gnn

SPT plugin providing default graph deep learning functionality

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A graph-transformer for whole slide image classification

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